CBME Curriculum AMCH  
Microbiology Phase II MBBS Lesson Plan  
Topic No. Lec.No. Comp. No. Titles: Topic, Competency with SLO & Lesson Teaching Methodology
1   Topic General Microbiology & Immunity  
  MI 1.1 Describe the different causative agents of Infectious diseases, the methods used in their detection, and discuss the role of microbes in health and disease  
1   Introduction and History Lecture
    SLO
1.History of Microbiology
2. Contributions of various scientists towards Microbiology
3. Koch's Postulate
  
2   Microscopy Lecture
    SLO
1.Parts&types of Microscope
2.Principles of each Microscrope
3.Uses of Microscope		  
3   Morphology of Bacteria Lecture
    SLO
1.Structure of Bacteria
2.Enumerate Staining techiniques		  
4   Overview of Gram positive bacterial infections Lecture
    SLO
1.Definition and examples of Gram positive cocci
2.Examples of gram positive bacilli
3.Media used and Antibiotics tested for gram negative bacteria		  
5   Physiology of Bacteria SDL
    SLO
1.Describe Bacterial growth curve
2.Describe Bacterial nutrition
3.Defintion of  Bacteriocins & its uses		  
6   Overview of Gram Negative Bacterial infections -1 Lecture
    SLO
1.Enumerate Gram negative cocci infection,
2.Media used and Antibiotics tested for Gram negative cocci infections
2.Enumerate Enterobacteriaceae and gram negative anaerobic infections		  
7   Overview of Gram Negative Bacterial infections-2 Lecture
    SLO
1.Enumerate Non fermenting gram Negative Bacterial infections
2.Media used and Antibiotics tested for Non fermenting Gram negatives
3.Rickettsiaceae and chlamydiae infections		  
8   Culture Media and Culture Methods SGD
    SLO
1.Types and uses of different bacterial culture media
2.Types of different culture methods		  
9   Bacterial Genetics Lecture
    SLO
1.Mechanism of Gene transfer
2.Definition, types & Uses of Plasmids
3.Mechanisms of drug resistance in Bacteria
  
10   Identification of Bacteria  Lecture
    SLO
1.Morphological & Staining methods of identification of bacteria		  
11   Identification of Bacteria  SGD
    SLO
1.Cultural characteristics & Biochemical tests used for  identification of bacteria		  
12   General Virology & Over view of Viral infection Lecture
    SLO
1.Classification of viruses
2.Methods of Cultivation of virus
  
13   Virus Host Interaction Lecture
    SLO
1.Pathogenesis of viral infections
2.Laboratory diagnosis of protozoal infections		  
14   General Parasitology & Overview of parasitic infections-Protozoal Lecture
    SLO
1.classification of parasites
2.pathogenesis  and labaratory diagnosis of protozoal  infectons
  
15   Overview of parasitic infections-Helminths  Lecture
    SLO
1.Pathogenis of helmints
2.Labaratory diagnosis of helmints		  
16   Normal Microbial Flora of Human Body SGD
    SLO
1.Role of Normal flora
2.Normal flora of skin and mucosal surfaces		  
17   Overview of fungal infections and General Mycology Lecture
    SLO
1.Classification of fungus
2.Labaratory diagnosis of fungal infections 		  
18   Microbial Pathogenesis SGD
    SLO
1.Different Sources of infection
2.Methods of transmission of infections
3.Types of infections diseases		  
19   Blood stream infections, sepsis, septic shock, CRBSI Lecture
    SLO
1.Definition of  BSI, sepsis, Septic shock & CRBSI
2.Types of blood stream infection
  
20   Rickettsial infections Lecture
    SLO
1.Classification of Rickettsial diseases
2.Pathogenesis &Laboratory diagnosis of Rickettsial diseases		  
  21   Plague SDL
    SLO
1.Etiopathogenesis of Plague
3.Laboratory diagnosis of Plague		  
22   Dengue, chikungunya, and Zikavirus SGD
    SLO
1.Pathogenesis of Dengue, chikungunya, and Zikavirus
2.Lab diagnosis of Dengue, chikungunya, and Zikavirus		  
23   Other viral hemorrhagic fever- Kyasanuar forest disease (KFD), Ebola and Marburg virus, Hantaviruses SGD
    SLO
1.Pathogenesis of  Kyasanuar forest disease (KFD), Ebola and Marburg virus, Hantaviruses
2.Lab diagnosis of  Kyasanuar forest disease (KFD), Ebola and Marburg virus, Hantaviruses		  
24   Trypanosomiasis  SGD
    SLO
1.Life cycle & etiopathogesis of Trypanosomiasis
2.Lab diagnosis of Trypanosomiasis 		  
25    Schistosomiasis Lecture
    SLO
1.Life cycle & Etiopathogenesis of Schistosomiasis
3.Laboratory diagnosis of Schistosomiasis		  
26   Systemic mycosis and Candidiasis Lecture
    SLO
1.Classification of Systemic mycosis
2.Pathogenesis of Systemic mycosis & Candidiasis
3.Laboratory diagnosis of Systemic mycosis & Candidiasis		  
27   Echinococcosis (hydatid disease)Other parasitic infections of liver- amoebic liver abscess , Fasciola hepatica infection

Parasitic infections infecting bile duct- Clonorchis, Opisthorchis
 Lecture
    SLO
1.Life cycle & etio Pathogenesis of Hepatobiliary Parasitic infections
2.Laboratory diagnosis of Hepatobiliary Parasitic infections		  
28   Infective syndromes of eye

SGD
    SLO
1.Etiopathogenesis of ophthalmic  infections
2.Laboratory diagnosis of ophthalmic  infections		  
29   Infective syndromes of ear, nose and oral cavity  SGD
    SLO
1.Etiopathogenesis of ENT infections
3.Laboratory diagnosis of ENT infections		  
30   Vector-borne infections ,Laboratory acquired infections SDL
    SLO
1.Etiology,Life cycle
2.Pathogenesis
3.Laboratory diagnosis		  
  MI 1.2 Perform and identify the different causative agents of Infectious diseases by Gram Stain, ZN stain and stool routine microscopy  
31,32   Microscopy Practical
    SLO
1.Diagram with Parts
2.Types & Principles of microscopes		  
33,34   Gram Staining-1 Practical
    SLO
1.Perform Gramstain for the given smear
2. Write the Observation & Inference		  
35,36   Morphology of Bacteria Culture media & Methods Practical
    SLO
1.Identify thepahogen from Microscopic appearance( spotters)
2. Identify the  Culture media and mention its uses
3.Identify the culture methods used (Anerobic jar OSPE)		  
37,38   Laboratory diagnosis of viral infections- microscopy,cultivation, serology, molecular tests Practical
    SLO
1.Identify the viral infection from the given clinical history & Histopathological stain
2.Identify the cultivation method used for Virus identification
3.Identify the Serological test/Molecular test used for Virus identification		  
39,40   Stool Microscopy -1
Peripheral blood smear		 Practical
    SLO
1.Perform the stool microscopy & Identify the parasite egg
2.Identify the The stages of parasite in peripheral blood smear		  
41,42   Gram Staining-2
Stool Microscopy-2		 Practical
    1.Perform Gramstain for the given smear
2.To record the Observation & Inference

1.Perform the stool microscopy & Identify the parasite egg
2.Identify the The stages of parasite in peripheral blood smear		  
43,44   Acid fast staining-1 Practical
    SLO
1.Perform Acid fast staining for the given smear
2.To Record the Observation &  Inferance		  
45,46   Acid fast staining-2 Practical
    SLO
1.Perform Acid fast staining for the given smear
2.To Record the Observation &  Inferance		  
47,48   Gram staining -3 Practical
    1.Perform Gramstain for the given smear
2.To record  the Observation & Inference		  
49,50   Parasitology
Stool Microscopy-3		 Practical
    SLO
1.To Perform the stool microscopy & Identify the parasite egg
2.Identify the The stages of parasite in peripheral blood smear
3. To identify the parasite from the given chart (OSPE)		  
51,52    Stool examination-4 Practical
      SLO
1.To Perform the stool microscopy & Identify the parasite egg
2.Identify the The stages of parasite in peripheral blood smear
3. To identify the parasite from the given chart (OSPE)		  
53,54   Stool microscopy-5
Intestinal amoebiasis, Giardiasis, Intestinal coccidian parasites		 Practical
    SLO
1.Perform the stool microscopy & Identify the parasite egg
2.Identify the The stages of parasite in peripheral blood smear
3. To identify the parasite from the given chart (OSPE)		  
55,56   Acid fast staining-3 Practical
    SLO
1.Perform Acid fast staining for the given smear
2.To Record the Observation &  Inference		  
57,58   Acid fast staining-4 Practical
    SLO
1.Perform Acid fast staining for the given smear
2.To Record the Observation &  Inference		  
  MI 1.1
 
MI 1.2		 Describe the different causative agents of Infectious diseases, the methods used in their detection, and discuss the role of microbes in health and disease

Perform and identify the different causative agents of Infectious diseases by Gram Stain, ZN stain and stool routine microscopy		  
59,60   Mycology-1
Laboratory diagnosis of  fungal infections--KOH mount, Gramstain (yeast), India ink, LPCB mount		 Practical 
    SLO
1.To identify the Staining technic & fungus  from the given Microscopic appearance
2.Record your observation		  
61,62   Mycology-2
Laboratory diagnosis of  fungal infections--KOH mount, Gramstain (yeast), India ink, LPCB moun		 Practical
    SLO
1.To identify the Staining technic & fungus  from the given Microscopic appearance
2.Record your observation		  
  MI 1.3 Describe the epidemiological
basis of common infectious diseases		  
63   Epidemiology of  infectious diseases SDL
    SLO
1.Definition of Epidemiology of Infectious diseases
2.Sources & Transmission of Infectious diseases
  
  MI 1.4 Classify and describe the different methods of sterilization and disinfection.Discuss the application of the different methods in the laboratory, in clinical and surgical practice  
64   Sterilization  Lecture
    SLO
1.Types of Sterilization
2.Methods & Uses of  Sterilization 		  
65   Sterilization and Disinfection & CSSD INTEGRATED
 LECTURE-1
    SLO
1.Role of CSSD in a hospital
2.Types of disinfection
3.Quality control		  
  MI 1.4

MI 1.5		 Classify and describe the different methods of sterilization and disinfection.Discuss the application of the different methods in the laboratory, in clinical and surgical practice

Choose the most appropriate method of sterilization and disinfection to be used in specific situations in the laboratory, in clinical and surgical practice
  
66   Disinfection SGD
    SLO
1.Types and Methods of  Disinfection
2.Tests & Uses of  Disinfection		  
  MI 1.5 Choose the most appropriate method of sterilization and disinfection to be used in specific situations in the laboratory, in clinical and surgical practice  
67,68   Sterilization and Disinfection  
    SLO
1.To segreggate the given articles in to respective  Sterilization and Disinfection method( OSPE)
2. CSSD ROUNDS		 Practical
  MI 1.6 Describe the mechanisms of drug resistance, and the methods of antimicrobial susceptibility testing and monitoring of antimicrobial therapy  
69   Antimicrobials: Antimicrobial Resistance,Antimicrobial Susceptibility Testing,  Lecture
    SLO
1.Types of  Drug Resistannce
2.Types & Uses of different  Antibitic susceptibility testing methods
  
70   Monitoring of antimicrobial therapy,Antimicrobial stewardship Lecture
    SLO
1.Definition & Purpose of Antimicrobial stewardship programme
2.Definition of Antibiotic Policy & its uses
 
  
71   Antimicrobial stewardship and Rational use of antimicrobial
agents		 Lecture
    SLO
1.Definition of Rational use of Antimicrobial agents
2.Principle of Empirical, Prophylactic & Definitive antibiotic therapy		  
72   Antimicrobials: Antimicrobial Resistance, Antimicrobial Susceptibility Testing,Steward ship INTEGRATED
 LECTURE-2
    SLO
1. Classification of Antimicrobial agents
2. Types of Antimicrobial Resistance
3.Antibiotic Stewardship programme		  
  MI 1.7 Describe the immunological  mechanisms in health  
73   Immunity (Innate and Acquired)-Immunologicalmechanisms in health Lecture
    SLO
1.Types of Immunity
2.Mechanism of Immunity 		  
  MI 1.8 Describe the mechanisms of immunity and response of the host immune system to infections  
74   Components of ImmuneSystem- Organs,cells and products Lecture
    SLO
1.Primary and secondary lymphoid organs
2.Classification & Function of T cell & B cell
  
75   Componentsof ImmuneSystem- Organs,cells and products SGD
    SLO
1. Definition of MHC
2. Types and Function of MHC		  
  76   Antigen & Antibody Lecture
    SLO
1.Definition,Types and Determinants of Antigen
2.Structure,Types & Function of Antibodies
3.Abnormal immunoglobulins		  
77   Antigen  Antibody  Reaction Lecture
    SLO
1.Types & Principle of antigen  and antibody reactions
2.Principle & Uses of RIA
3.Principle , Types & uses of ELISA		  
78   Complement SGD
    SLO
1.Componenets & Pathways of Complement
2.Biological effects of Complement
3.Complement Deficiency disorders		  
79   Immune Responses:  Antibody-mediated   Lecture
    SLO
1.Types of Immune response
2.Factors influencing Antibody production & Monoclonal antibodies`		  
80   Immune Responses:  Cell-mediated (CMI) Lecture
    SLO
1.Scope of CMI
2.Function & Detection of CMI
3.Mechanism of  Immunological tolerance		  
  MI 1.8

 MI  8.15		 Describe the mechanisms of immunity and response of the host immune system to infections

Choose and Interpret the results of the laboratory tests used in diagnosis of the infectious disease
  
81,82   Antigen-Antibody Reaction
 (conventional)- agglutination and precipitation		 Practical
    SLO
1.Identify the Serological test
2.Explain the Principle of the given serological test
3.Interpret and mention the uses of the test		  
  MI 1.9 Discuss the immunological basis of  vaccines  and describe the Universal Immunisation schedule  
83   Immunoprophylaxis  INTEGRATED
 LECTURE-3
    SLO
1.Immunological basis of vaccines
2.Types of Vaccine
3.Universal immunisation schedule		  
  MI 1.10 Describe the immunological mechanisms in immunological disorder (hypersensitivity, autoimmune disorders and immunodeficiency states) and discuss the laboratory methods used in detection.  
84   Autoimmunity SGD
    SLO
1.Mechanism of auto immunity
2.List of Auto immune disorders		  
85   Hypersensitivity Lecture
    SLO
1.Types of Hypersensitivity
2.Mechanism & Examples of Hypersensitivity		  
86   Immunodeficiency
Disorders		 Lecture
    SLO
1.Classification of Primary immunodeficiency disorders
2.Secondary immunodeficiency disorders		  
  MI 1.11 Describe the immunological mechanisms of  transplantation and tumor immunity  
87   Transplant and Cancer Immunology
 Lecture
    SLO
1.Immunology of transplantation
2.Types of Graft , Graft rejection. Graft vs Host disease
3..Immunogy of malignancy		  
88   Immunohaematology SGD
    SLO
1.Blood grouping system
2.Application of blood group
3.Pathogenesis,Diagnosis & Prophylaxis of RH incompatibility & ABP Incompatibility		  
 
2   TOPIC Cardio vascular
 System & Blood 		  
  MI 2.1


MI 2.2
 Describe the etiologic agents in rheumatic fever 
and their diagnosis

Describe the classification etio-pathogenesis, clinical features and discuss the diagnostic modalities of Infective endocarditis		  
89   Infectionsof CVS-
Rheumaticfever,Infective endocarditis.
Other infections of CVS  - myocarditis and pericarditis, suppurative thrombophlebitis, infective endoarteritis, mycotic aneurysm, mediastinitis		 INTEGRATED
 LECTURE-4
    SLO
1.Etiopathogenesis & Lab diagnosis of Rheumatic fever & Infective endocarditis
2.Etiopathogenesis of myocarditis and pericarditis, suppurative thrombophlebitis, infective endoarteritis, mycotic aneurysm, mediastinitis
  
  MI 2.3

 MI 8.15		 Identify the microbial agents causing
Rheumatic Heart Disease & infective Endocarditis

Choose and Interpret the results of the laboratory tests used in diagnosis of the infectious disease
  
90,91   Sepsis, CRBSI, Rheumatic fever,
Infective endocarditis		 Practical
    SLO
1.To identify the given serological test,
2.Interpret&  Mention the principle of the test
3.Identify the pathogen from the given colony morphology , biochemical tests and interpret the AST  		  
  MI 2.4 List the common microbial agents causing anemia.Describe the morphology, mode of infection anddiscuss the pathogenesis, clinical course, diagnosis  and prevention and treatment of the common microbial agents causing Anemia  
92   Infections causing  anemia SDL
    SLO
1.Classification & pathogenesis of anemia
2.Microorganisim causing anemia 		  
  MI 2.5
 
MI 1.1
 Describe the etio-pathogenesis and discuss
the clinical evolution and the laboratory diagnosis of kalaazar, malaria, filariasis and other common parasites prevalent in India

Describe the different causative agents of Infectious diseases, the methods used in their detection, and discuss the role of microbes in health and disease		  
93   Malaria-1 Lecture
    SLO
1.Classification of Plasmodium
2.Lifecycle & pathogenesis of Plasmodium		  
94   Malaria-2
Babesiosis		 Lecture
    SLO
1.Complication & lab diagnosis  of Malaria
2.Life cycle, pathogenesis&lab diagnosis of Babesiosis		  
95   Leishmaniasis Lecture
    SLO
1.Life cycle and pathogenesis of Leishmaniasis
2.Lab diagnosis of Leishmaniasis		  
96   Lymphatic filariasis Lecture
    SLO
1.Classification & life cycle, lymphatic filariasis
2.Lab diagnosis of Filariasis		  
  MI 2.6

MI 8.15		 Identify the causative agent of malaria and filariasis


Choose and Interpret the results of the laboratory tests used in diagnosis of the infectious disease
  
97,98   Malaria,Leishmaniasis,
 Lymphatic filariasis		 Practical
    SLO
1.Identify the pathogen & its stage in the pheriperal blood smear picture
2.Record your Observation & Inference		  
  MI 2.7 Describe the epidemiology,  the etio- pathogenesis, evolution complications, opportunistic infections, diagnosis, prevention and the principles of management of HIV  
99   HIV INTEGRATED
 LECTURE-5
    SLO
1.Morphology of HIV
2.Epidemiology and pathogenesis of HIV
3.Clinical feature & lab diagnosis of HIV
4.Opportunistic infections & malignancy associated with HIV		  
  MI 2.7


  MI 8.15

 Describe the epidemiology,  the etio- pathogenesis, evolution
complications, opportunistic infections, diagnosis, prevention
and the principles of management of HIV

Choose and Interpret the results of the laboratory tests used in diagnosis of the infectious disease
  
100,101   HIV and Dengue,  Practical
    SLO
1.To Identify the serological test
2.What is the principle of the serological test
3.To Record the Interpretation of test		  
 
3   TOPIC Gastro Intestinal  &
Hepato biliary system		  
  MI 3.1 Enumerate the microbial agents causing  diarrhea and dysentery. Describe the  epidemiology, morphology, pathogenesis,
clinical features and diagnostic modalities  of these agents		  
102   Normal commensals
Gastrointestinal infective syndromes
Lecture
    SLO
1.List of normal commensals of GIT
2.Classify GI infective syndrome -diarrhoeal dieases,food poisoning,infections of GI tract		  
103   Shigellosis
Nontyphoidal salmonellosis Diarrheogenic E.coli
 Lecture
    SLO
1.Classification,identification,pathogenesis & lab diagnosis of shigellosis
2.Pathogenesis, lab diagnosis of non typhoidal salmonellasis
3.Diarrhoeagenic strains of E.Coli(Pathogenesis, lab diagnosis)		  
104   Cholera and halophilic Vibrio infections Lecture
    SLO
1.Classification of Vibrio
2.Pathogenesis & lab diagnosis of Vibrio cholera & Halophilic Vibrio 		  
105   Viral gastroenteritis Lecture
    SLO
1.Enumerate Viruses causing gasteroenteritis
2.Lab diagnosis & Prophylaxis of viral gasteroenteritis		  
106   Intestinal amoebiasis
Balantidiasis 		 SGD
    SLO
1.Morphological forms of Entameba histolytica & Balantidium coli
2.Pathogenesis & lab diagnosis of Intestinal amoebasis & Balantidiasis		  
107   Giardiasis
Intestinal coccidian parasites and microsporidia infections

 Lecture
    SLO
1.Morphological forms of Giardia lambia
2.life cycle,Pathogenesis & lab diagnosis of Giardia
3.Life cycle, pathogenesis & lab diagnosis of intestinal cocidian & microscoporium infection		  
108   Intestinal cestode infections - Diphyllobothrium latum ,
Taenia, Hymenolepis
Intestinal trematodes infections – Fasciolopsis buski
 Lecture
    SLO
1.Morphological forms of intestnal Cestodes & Trematodes
2.Life cycle ,pathogenesis & lab diagnosis of Intestinal Cestode& Trematodes		  
109   Intestinal nematodes- Ascaris, hookworm, Trichuris,
Enterobius and Strongyloides		 SGD
    SLO
1.Morphological forms Intestinal Nematodes
2.Life cycle, pathogenesis &lab diagnosis of Intestinal Nematodes		  
  MI 3.2

MI 8.15		 Identify the common etiologic agents of  diarrhea and dysentery

Choose and Interpret the results of the laboratory tests used in diagnosis of the infectious disease
  
110,111   Dysentery(Shigellosis),
Diarrhea (NTS, cholera)		 Practical
    SLO
1.Identify the given pathogen from the clinical history, colony morphology & biochemical tests
2.Interpret & Record the Antibiotic sensitivity  		  
112,113   Intestinal cestode and nematode infection(OSPE) Practical
    SLO
1.Identify the parasite from the given Picture & Chart
  
  MI 3.3 Describe the enteric fever pathogens and   discuss the evolution of the clinical course  and the laboratory diagnosis of the diseases
caused by them		  
114   Enteric (typhoid) fever Lecture
    SLO
1.Etiopathogenesis ,lab diagnosis & prophylaxis of enteric fever 		  
  MI 3.4

MI 8.15		 Identify the different modalities for diagnosis of  enteric fever. Choose the appropriate test related to the duration of illness

Choose and Interpret the results of the laboratory tests used in diagnosis of the infectious disease		  
115,116   Enteric (typhoid) fever,
Brucellosis,Leptospirosis		 Practical
    SLO
1.Identify the given serological test
2.Principle of the test, interpret the given test		  
 
MI 3.5
.
MI 3.1
 Enumerate the causative agents of  food poisoning and discuss the pathogenesis, clinical course and laboratory diagnosis

Enumerate the microbial agents causing  diarrhea and dysentery. Describe the  epidemiology, morphology, pathogenesis,
clinical features and diagnostic modalities  of these agents		  
117   Food poisoning- Bacillus cereus , Clostridium botulinum , mycotoxins
Antibiotic associated diarrhea- Clostridiodes difficile
 Lecture
    SLO
1.Etiopathogenesis ,lab diagnosis of food poisoning
2.Pathogenesis &lab diagnosis of antibiotic associated diarrhea		  
  MI 3.6


 Describe the etio-pathogenesis of Acid peptic disease (APD) and the
clinical course. Discuss the diagnosis and management of the causative agent of APD		  
118   Helicobacter infection (acid peptic disease)
Campylobacter infections Yersiniosis
 SGD
    SLO
1.Etiopathogenesis & lab diagnosis of acid  peptic disease
2.Morphology,pathogenesis & lab diagnosis of Campylobacter infection&Yersiniosis		  
  MI 3.7 Describe the epidemiology, the etio-pathogenesis and discuss the viral markers in the evolution of Viral hepatitis. Discuss the modalities in the diagnosis and prevention of viral hepatitis  
119   Agents of Viral Hepatitis
-Hepatitis B  viruse

 INTEGRATED
 LECTURE-7
    SLO
1.Epidemiology & etiopathogenesis& Serological markers of Hepatitis B virus
2.Lab diagnosis & Prevention of hepatitis B virus		  
120   Agents of Viral Hepatitis
- other Hepatitis viruse

 Lecture
    SLO
1.Epidemiology ,etiopathogenesis of hepatitis A,E,C,D viruses
2.Lab diagnosis &Prevention of Hepatitis A,E,C,D viruses		  
121   Agents of Viral Hepatitis
-Yellow fever
-Cytomegalovirus
-Epstein-Barr virus
 SGD
    SLO
1.Epidemiology ,etiopathogenesis of yellow fever, Cytomegalo virus & Epsteinbarr virus
2.Lab diagnosis of Yellow fever ,Cytomegalo virus &Epsteinbarr virus
3.Prophylaxis of yellow fever 		  
  MI 3.8

 MI 8.15		 Choose the appropriate laboratory test in
the diagnosis of viral hepatitis with emphasis on viral markers

Choose and Interpret the results of the laboratory tests used in diagnosis of the infectious disease		  
122,123   Viral Hepatitis, parasites causing liver infection Practical
    SLO
1.Identify the serological test
2.Principle of the test & interpretation of given test
3.Identify the given parasite		  
 
4   TOPIC Musculoskeletal system
SKIN
& Soft tissue infections
  
  MI 4.1




MI 4.2


MI 4.3		 Enumerate the microbial agents causing
anaerobic infections. Describe the etiopathogenesis,  clinical course and discuss the laboratory diagnosis
of anaerobic infections

Describe the etiopathogenesis, clinical course and discuss the laboratory diagnosis of bone & joint infections

Describe the etio-pathogenesis of infections of skin and soft tissue and discuss the clinical course and the laboratory diagnosis		  
124   Infective syndromes of skin, soft tissue, musculoskeletal systems  Lecture
    SLO
1.List out the infective syndrome of the skin,soft tissue & musculo skeletal syndrome
2.Etiology of the infective syndromes 		  
  MI 4.1



MI 4.3


MI 8.15
 Enumerate the microbial agents causing
anaerobic infections. Describe the etiopathogenesis,  clinical course and discuss the laboratory diagnosis
of anaerobic infections

Describe the etio-pathogenesis of infections of skin and soft tissue and discuss the clinical course and the laboratory diagnosis

Choose and Interpret the results of the laboratory tests used in diagnosis of the infectious disease		  
125,126   Staphylococcal, Streptococcal infections and Anaerobic infections Practical
    SLO
1.Identify the given bacterial infection from the colony morphology, biochemical reaction
2.Interpret & record the antibiotic sensitivity  		  
127   Gas gangrene (Clostridium perfringens ) Tetanus (Clostridium tetani )
Infections due to non-spring anaerobes		 Lecture
    SLO
1.Etiopathogenesis and lab diagnosis of Gasgangrene & Tetanus
2.Enumerate the non-sporing anaerobes & infection produced by them		  
128   Tetanus, botulism
Neurocysticercosis
 Lecture
    SLO
1.Etiopathogenesis & CNS manifestation of Tetanus
2.Etiopathogenesis of Botulism & Neurocysticercosis
3.Lab diagnosis of Botulism & Neurocysticercosis		  
  MI 4.3 Describe the etio-pathogenesis of infections of skin and soft tissue and discuss the  clinical course and the laboratory diagnosis  
129   Staphylococcal infections  Lecture
    SLO
1.Classify & Enumerate the virulence  factors of Staphlococcus
2.Enumerate the Staphlococcal infections
3.Lab diagnosis of Staphylococcus infections 		  
130   Streptococcal infections pertaining to SSTI
Anthrax (Bacillus anthracis )
 SGD
    SLO
1.Classify Streptococcus & Enumerate the  virulence factors / etiopathogenesis of Streptococcal skin infections
2.Lab diagnosis of Streptococcus infections 
3.Enumerate etiopathogenesis & lab diagnosis of Anthrax 		  
131   Leprosy SDL
    SLO
1.Etiopathogenesis & lab diagnosis of Leprosy
2.Types of lepra reactions		  
132   Infection due to non-fermeneters :(Pseudomonas, Acinetobacter, Stenotrophomonas, Burkholderia including Melioidosis)

Infection due to Actinomycetes and Nocardia
 Lecture
    SLO
1.List out the Non-formenting gram negative bacilli(NFGNB)& enumerate the etiopathogenesis & lab diagnosis of NFGNB
2.Morphology, etiopathogenesis ,lab diagnosis of Actinomycetes & Nocardia		  
133   Viral exanthems :  parvovirus, HHV-6, Pox viruses, Varicella zoster (chickenpox and zoster)
Viral exanthems -)Measles, rubella
Herpes simplex		 Lecture
    SLO
1.Definition & etiology of viral exanthems
2.A note on Parvovirus ,HHV6.Poxvirus ,Varicella zoster
3.Enumerate etiopathogenesis & lab dignosis of Measles, Rubella & Herpes simplex		  
134   Superficial fungal infections
Subcutaneous fungal infections Cutaneous and mucosal Candidiasis
Penicillium marneffei		 Lecture
    SLO
1.Classify superficial Mycosis
2.Clinical features & lab diagnosis of Dermatophytes
3.Pathogenesis, clinical features & lab diagnosis of Candidiasis
4.Pathogenesis & lab diagnosis of Pencillium marneffei		  
  MI 4.3


 MI 8.15		 Describe the etio-pathogenesis of infections of skin and soft tissue
 and discuss the clinical course and the laboratory diagnosis

Choose and Interpret the results of the laboratory tests used in diagnosis of the infectious disease
  
135,136   Anthrax,Leprosy,Pseudomonas , Melioidosis, Actinomycetes
and Nocardia		 Practical
    SLO
1.Identify the given bacterial  from the colony morphology, biochemical reaction and Interpret  the antibiotic sensitivity
2.Identify clinical condition ,etiology from the given chart (OSPE)		  
137,138   SSTI due to Superficial
and Subcutaneous fungal infections,Cutaneous and mucosal Candidiasis		 Practical
    SLO
1.Identify the given fungus from the culture, slide and clinical chart		  
139   Tissue nematode infections of skin and soft-tissue-
 Onchocerca, Loa loa, Mansonella and Dracunculus , Trichinella, cysticercosis, Larva migrans and other parasitic
infections of lower animals infecting man
 SGD
    SLO
1.Life cycle,etiopathogenesis & lab diagnosis of Oncocerca ,Loa loa ,Mansonella,Drancunculus
2.Morphology ,etiopathogenesis & lab diagnosis of Cysticercosis
3.Etiology, clinical features & lab diagnosis of Larva migrans		  
 
5   TOPIC Central Nervous
system infections		  
  MI 5.1 Describe the etiopathogenesis,  clinical course and discuss the
 laboratory diagnosis of meningitis		  
140   Infective syndromes of CNS  Lecture
    SLO
1.List the various infective syndromes of CNS
2.Etiology of infective syndrome of CNS		  
141   Agents of pyogenic meningitis: Neisseria meningitidis,
Streptococcus pneumoniae,
Streptococcus agalactiae, Haemophilus influenzae, Listeria
 Lecture
    SLO
1.Morphology, etiopathogenesis & lab diagnosis of Neisseria meningitis
2.Morphology, etiophogenesis & lab diagnosis of Streptococcus pneumonia, Haemophillus influenzae, Listeria		  
142   Agents of aseptic meningitis-1:
 Viral agents: (including polio, coxsackie virus, mumps)		 SGD
    SLO
1.Morphology, clinical feature,  lab diagnosis & prophylaxis of Polio virus
2.Etiopathogenesis & lab diagnosis of coxssackie virus & mumps 		  
143   Agents of aseptic meningitis-2: Other agents: Spirochaetal meningitis, tubercular meningitis, cryptococcal meningitis
and other fungi affecting CNS		 Lecture
    SLO
1.Clinical feature & lab diagnosis of different types of Aseptic meningtitis 		  
  MI 5.2 Describe the etiopathogenesis,  clinical course and discuss the
 laboratory diagnosis of encephalitis		  
144   Viral agents of encephalitis-1: Arboviral encephalitis (JE and Westnile), Nipah virus infection, Slow viral infections Lecture
    SLO
1.Classification of Arbovirus, etiology, clinical featurs & lab diagnosis  of Japanese B encephalis, Nipah virus & Slow virus infection		  
145   Viral agents of encephalitis-2: Rabies and HSV encephalitis SGD
    SLO
1.Morphology & etiopathogenesis  of Rabies & HSV
2.Clinical stages, lab diagnosis & prophylaxis of Rabies
3.Lab diagnosis of HSV		  
146   Parasites causing encephalitis:
toxoplasmosis
Lecture
    SLO
1.Morphology, life cycle of Toxoplasma
2.Clinical feature & lab diagnosis of Toxoplasmosis		  
147   Parasites causing encephalitis:
Primary amoebic meningoencephalitis (Naegleria), granulomatous ameobic encephalitis (Acanthamoeba and Balamuthia ),		 SGD
    SLO
1.Etiopathogenesis and lab diagnosis of primary amoebic meningoencephalitis & Granulomatous ameobic encephalitis 		  
  MI 5.2


 MI 5.3

MI 8.15		 Describe the etiopathogenesis,  clinical course and discuss the
 laboratory diagnosis of encephalitis

Identify the microbial agentscausing meningitis

Choose and Interpret the results of the laboratory tests used in diagnosis of the infectious disease		  
148,149   Agents of pyogenic meningitis (N.meningitidis,
Streptococcus pneumoniae, S.agalactiae, Haemophilus

Aseptic meningitis
(tubercular meningitis, cryptococcal
meningitis) and Encephalitis
 Practical
    SLO
1.Identify the bacteria from microscopy, colony morphology and biochemical reactions, and interpret the antibiotic sensitivity test
2.Identify the pathogen from the given Chart (OSPE)		  
 
6   TOPIC RESPIRATORY
 TRACT INFECTIONS		  
  MI 6.1 Describe the etio-pathogenesis, laboratory  diagnosis and prevention of Infections of upper and lower respiratory tract  
150   Normal commensals
and defense mechanisms Infective syndrome of respiratory system 		 Lecture
    SLO
1.Enumerate the normal flora of various parts of human body
2.Describe the role of normal flora
3.Enumerate the defense mechanisms of Respiratory tract		  
151   Bacterial URTI: -
Diphtheria ,Group A Streptococccus
SDL
    SLO
1.Etiopathogenesis, lab diagnosis of Diphtheria & group A Streptococci
2.Prophylaxis of Diphtheria		  
152   Viral URTI-1: Rhinovirus, adenovirus and infectious mononucleosis (EBV)
Fungal URTI: Zygomycosis		 Lecture
    SLO
1.Etiopathogenesis and lab diagnosis of Adenovirus EB virus and Rhinovirus
2.Etiopathogenesis and lab diagnosis of zygomycosis		  
153   Viral URTI-1: Influenza-like illness
and orthomyxovirus & SARS COV 2		 Lecture
    SLO
1.Etiopathogenesis of Influenza like illness
2.Lab diagnosis of Orthomyxo virus and SARS Cov-2		  
154   Agents of typical pneumonia:
Pneumococcal pneumonia , Haemophilus influenzae
Bordetella infections
 SGD
    SLO
1.Etiology and lab diagnosis of Pnemococcal pnemonia , Bordetella and H.influenza infection
2.Enumerate the prophylaxis 		  
155   Tuberculosis -MTB INTEGRATED
 LECTURE-6
    SLO
1.Morphology of Mycobactrieum tuberculosis
2.Lab diagnosis of Tuberculosis
3.Pathogenesis & clinical features of pulmaonary and extra pulmonary tuberclosis
4.Prophylaxis and treatment for Tuberclosis		  
156   Non-tuberculous Mycobacteria Lecture
    SLO
1.Classify Non-tuberculous Mycobacteria
2.Pathogenesis and lab diagnosis of Non-tuberculous Mycobacteria		  
157   Agents of atypical pneumonia(Bacterial):
Mycoplasma, Chlamydia and Legionella
 SGD
    SLO
1.Etiopathogenesis of Atypical Pneumonia
2.Lab diagnosis of Mycoplasma, Chlamydia and Legionella		  
158   Viral agents of LRTI
Paramyxovirus infections- Parainfluenza, RSV
Lecture
    SLO
1.Etiopathogenesis of Paramyxovirus infections
2.Lab diagnosis of RSV and Para infiuenza virus 		  
159   Viral agents of LRT-
Coronaviruses including SARS-CoV and MERS CoV		 Lecture
    SLO
1.Classification & morphology of Corona viruses
2.Pathogenesis, epidemiology and lab diagnosis of MERS COV and SARS COV2		  
160   Fungal agents causing respiratory tract infection: zygomycosis, aspergillosis, pneumocystosis Parasitic agents causing respiratory tract infection:
paragonimiasis
 SGD
    SLO
1.Etiolopathogenesis and  lab diagnosis of zygomycosis, Aspergilliosis, Penumocystosis
2.Lifecycle, pathogenesis lab diagnosis of Paragonimiasis		  
  MI 6.2 Identify the common etiologic agents of
 upper respiratory tract infections
 (Gram Stain)		  
161,162   URTI (beta hemolytic streptococci,
 diphtheria, influenza)
Throat swab Gram staining-1,2,3 (smears made from
S.pyogenes, C.diphtheriae Candidia ) and certification
 Practical
    SLO
1.Perform gram stain of the throat swab
2.Report on the gram stain and give the presumptive diagnosis		  
  MI 6.3 Identify the common etiologic agents of  lower respiratory tract infections  (Gram Stain & Acid fast stain)  
163,164   S.pneumoniae,Klebsiella ,H.influenzae  Practical
    SLO
1.Identify the bacterial pathogen from the colony morphology and biochemical reactions
2.Interpret the antibiotic sensitivity report 		  
165,166   LRTI (Pneumococcal pneumonia, Haemophilus influenzae ,Kleb pneumoniae agents of atypical pneumonia)
 Practical
    SLO
1.Identify the bacterial pathogen from the colony morphology and biochemical reactions
2.Interpret the antibiotic sensitivity report 		  
 
7   TOPIC GENITO URINARY
& STD infections		  
  MI 7.1

MI  7.3
 Describe the etio-pathogenesis and discuss  the laboratory diagnosis of infections of genitourinary system

Describe the etio-pathogenesis, clinical features, the appropriate method for specimen collection, and discuss the laboratory diagnosis of Urinary tract infections		  
167   Normal commensals of genitourinary tract &  Urinary tract infections Lecture
    SLO
1.List out the normal commensals of genito urinary tract
2.Enumerate the genito urinary tract infections		  
  MI 7.2 Describe the etio-pathogenesis and  discuss the laboratory diagnosis of sexually transmitted infections. Recommend preventive measures  
168   Agents of genital ulcers-1- Syphilis Lecture
    SLO
1.Morphology and etiopathogenesis of Treponema pallidum
2.Lab diagnosis of Syphilis		  
169   Agents of genital ulcers-2- LGV, Granuloma inguinale, soft chancre, HSV
 Lecture
    SLO
1.Etiopathogenesis, lab diagnosis of LGV, Granuloma inguinale, soft chancre, HSV		  
170   Sexually transmitted infections  INTEGRATED
 LECTURE-8
    SLO
1.Classification of Sexullay transmitted diseases
2.Etiopathegenesis and clinical features of STDs
3.Lab diagnosis of STDs
4.Epidemiology & prevention of STDs 		  
171   Sexually transmitted infections

SDL
    SLO
1.Etiopathogenesis and lab diagnosis of genital discharge producing infections		  
  MI 7.3 Describe the etio-pathogenesis, clinical  features, the appropriate method for  specimen collection, and discuss the laboratory diagnosis of Urinary tract infections  
172   Agents of UTI: Uropathogenic E.coli, Klebsiella, Proteus, Enterococcus (in detail), Staphylococcus saprophyticus,Streptococus agalactiae
 SGD
    SLO
1.Etiopathogenesis of UTI
2.Specimen collection & lab diagnosis of UTI		  
173,174   UTI (Uropathogenic E.coli, Klebsiella,Proteus, Enterococcus, Staphylococcus saprophyticus, Streptococus agalactiae ) Practical
    SLO
1.Identify the bacteria causing UTI by given colony  morphology and biochemical test
2.Interpret the antibiotic sensitivity test		  
 
8   TOPIC Zoonotic disease
 &
Miscellaneus 		  
  MI 8.1 Enumerate the microbial agents and their  vectors causing Zoonotic diseases. Describe the morphology, mode of transmission, pathogenesis and discuss the clinical course,laboratory diagnosis and prevention  
175   Brucellosis, Leptospirosis  and Borreliosis SGD
    SLO
1.Morphology, etiopathogeesis of Brucella, Leptospirosis  and Borreliosis
2.Etiopathogenesis & lab diagnosis of of Brucella, Leptospirosis  and Borreliosis		  
176   Zoonotic infections Lecture
    SLO
1.Enumerate common zoonotic infections
2.Laboratory  procedure for different zoonotic infections 		  
177   Congenital infections (TORCH) SGD
    SLO
1.Etiopathogenesis of TORCH infections
2.Lab diagnosis of TORCH infections 		  
  MI 8.2 Describe the etio-pathogenesis of  Opportunistic infections (OI) and discuss the factors contributing to the occurrence  of OI, and the laboratory diagnosis  
178   Opportunistic infections (immunocompromised patients)
including Transplant infections		 Lecture
    SLO
1.Definition of Opportunistic infections
2.Enumerate the Opportunistic infections		  
179    Opportunistic infections (immunocompromised patients) including Transplant infections
 INTEGRATED
 LECTURE-9
    SLO
1.Etiopathogenesis of Opportunistic infections
2.Lab diagnosis of opportunistic infection 		  
  MI 8.3 Describe the role of oncogenic viruses
in the evolution of virus associated malignancy		  
180    Organisms of oncogenic potential SGD
    SLO
1.Classification of oncogenic vituses
2.Etiopathogenesis of oncogeneic viruses
3.A note on oncogenes 		  
  MI 8.4 Describe the etiologic agents of emerging
Infectious diseases. Discuss the clinical course and diagnosis		  
181   Emerging and Re-emerging Infections
Microbial agents of Bioterrorism		 SGD
    SLO
1.Factors cotributing to emerging infections
2.List of emerging & remerging infections in india
3.Microbial agents of bioterrorism & their role 		  
  MI 8.5


MI 8.6,
 Define Healthcare Associated Infections (HAI) 
and enumerate the types. Discuss the factors thatcontribute to the development of HAI and the methods for prevention

Describe the basics of Infection control

  
182   Hospital acquired infection (definition, risk factors, handhygiene and PPE) Lecture
    SLO
1.Definition & indicators of HAI
2.Steps & five moments of handheigeine
3.Sequence of donning & doffing of PPE		  
183   Hospital  acquired infections (surveillance and prevention
including care bundle) – CAUTI, CRBSI, VAP, SSI		 Lecture
    SLO
1.Surviellance of CAUTI, CRBSI, VAP, SSI
2.Prevention & care bundle of HAI		  
184   Biomedical waste
Needle stick injury		 SDL
    SLO
1.Biomedical waste management latest rules  & guidelines
2.Segrregation & disposal of biomedical waste
3.Surviellance & prevention of NSI		  
  MI 8.7 Demonstrate Infection control practices
 and use of Personal Protective Equipments (PPE)		  
185,186   Hand Hygiene ,PPE,
Biomedical waste		 Practical
    SLO
1.To perform steps of hand hygeine
2.To segregate the given biomedical waste into apprapriate colour coded bins
3.To perform the sequence of donning/ doffing of PPE		  
187,188   Practical test:
Hand Hygiene ,PPE,
Biomedical waste		 Practical
    SLO
1.To perform steps of hand hygeine
2.To segregate the given biomedical waste into apprapriate colour coded bins
3.To perform the sequence of donning/ doffing of PPE		  
  MI 8.8 Describe the methods used and significance  of assessing the microbial contamination of food, water and air  
189    Environmental surveillance (bacteriology of water, air, milk
and surface)		 SGD
    SLO
1.Detection of coliform bacteria & E.Coli 
(a) Presumptive coliform count
(b) Eijkam test
2.Detection of fecal Streptococci
3.Difference between airborne transmission & droplet transmissoin
4.Etiopathogenesis & lab diagnosis of milk borne infections		  
  MI 8.9 Discuss the appropriate method of collection of samples in the performance of laboratory tests in the  detection of microbial agents causing infectious diseases  
190   Specimen collection and transport SGD
    SLO
1.Differnet  types of clinical  samples
2.Methods of collection & transport of blood, urine, sputum, throat swab & other specimens 		  
  MI 8.10 Demonstrate the appropriate method of collection of samples in the performance of laboratory tests in the detection of microbial agents causing Infectious diseases  
191,192   Specimen collection and transport Practical
    SLO
1.To perform collection of blood for blood culture & sensitivity
2.To perform nasopharyngeal swab/ throat swab colletion
3.To perform collection of urine from catheterised patient		  
  MI 8.11

MI 8.14		 Demonstrate respect for patient samples sent
to the laboratory for performance of laboratory tests in the detection  of microbial agents causing Infectious diseases

Demonstrate confidentiality pertaining to patient identity in laboratory results(8.14)		  
193,194    Demonstrate respect for patient samples sent for lab
investigations

Demonstrate confidentiality pertaining to patient's identity
in lab result		 Practical/AETCOM
    SLO
1.To demonstrate confidentiality for the patients lab report 		  
  MI 8.12 Discuss confidentiality pertaining to patient
identity in laboratory results		  
195    Confidentiality pertaining to patient's identity in lab resul Lecture
    SLO
1.Application of confidentiality  related to lab result 		  
  MI 8.13 Choose the appropriate laboratory test in
 the diagnosis of the infectious disease		  
196   Choose appropriate labaratory test in diagnosis of infectious disease (Rational use of microbiological investigations
SGD
    SLO
1.Choice of lab test for different stages of typhoid fever
2.Choice of lab test for different stages  of COVID -19		  
  MI 8.16 Describe the National Health Programs in  the prevention of common infectious disease(for information purpose only as taught in CM)  
197   National health programs INTEGRATED
 LECTURE-10
    SLO
1.Objectives of national health programme
2.List of national health programes  in india